Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs78897629 | chr21:47604837 | C/A | 2.18E-8 | 211 | 16.47 | 14.87 | 1.9 | KM Plot |
| KIRP | rs7896703 | chr10:102018631 | A/T | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |
| KIRP | rs7897454 | chr10:102011702 | G/A | 7.43E-7 | 213 | 15.88 | 22.77 | 1.63 | KM Plot |
| KIRP | rs78985317 | chr10:75514465 | C/T | 0 | 212 | 15.33 | 18.03 | 2.47 | KM Plot |
| KIRP | rs7899171 | chr10:63494376 | A/G | 0 | 214 | 18.03 | 6.83 | 3.38 | KM Plot |
| KIRP | rs79021324 | chr14:59941424 | A/G | 0.000267 | 213 | 16.45 | 14.1 | 6.63 | KM Plot |
| KIRP | rs7902522 | chr10:102020429 | G/A | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs7903789 | chr10:63486283 | T/G | 0 | 212 | 18.47 | 6.83 | 3.38 | KM Plot |
| KIRP | rs7903791 | chr10:63486291 | T/A | 0 | 213 | 18.25 | 6.83 | 3.38 | KM Plot |
| KIRP | rs7907661 | chr10:70740091 | C/T | 6.62E-9 | 214 | 14.97 | 18.03 | 9.77 | KM Plot |
| KIRP | rs7911 | chr1:89518120 | A/G | 0.000631 | 211 | 17.13 | 17.03 | 10.83 | KM Plot |
| KIRP | rs7915269 | chr10:74853320 | G/A | 5.82E-12 | 212 | 16.53 | 13.03 | 5.6 | KM Plot |
| KIRP | rs79158555 | chr1:20335336 | T/C | 5.91E-7 | 204 | 15.88 | 19.53 | 9.77 | KM Plot |
| KIRP | rs79180690 | chr14:59891393 | G/A | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
| KIRP | rs79193705 | chr16:4523099 | T/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |